Uniwersytet Rolniczy w Krakowie - Ośrodek Medycyny Eksperymentalnej i Innowacyjnej

Publikacje

Brzychczy-Sroka B., Talaga-Ćwiertnia K., Sroka-Oleksiak A., Gurgul A., Zarzecka-Francica E., Ostrowski W., Kąkol J., Drożdż K., Brzychczy-Wloch M., Zarzecka J., 2024. Standardization of the protocol for oral cavity examination and collecting of the biological samples for microbiome research using the next-generation sequencing (NGS): own experience with the COVID-19 patients. Scientific Reports; 14, 1–14.

Gabryś J., Gurgul A., Szmatoła T., Kij-Mitka B., Andronowska A., Karnas E., Kucharski M., Wojciechowska-Puchałka J., Kochan J., Bugno-Poniewierska M., 2024. Follicular Fluid-Derived Extracellular Vesicles Influence on In Vitro Maturation of Equine Oocyte: Impact on Cumulus Cell Viability, Expansion and Transcriptome. International Journal of Molecular Sciences; 25, 1–23.

Lenart-Boroń A., Stankiewicz K., Czernecka N., Ratajewicz A., Bulanda K., Heliasz M., Sosińska D., Dworak K., Ciesielska D., Siemińska I., Tischner M., 2024. Wounds of Companion Animals as a Habitat of Antibiotic-Resistant Bacteria That Are Potentially Harmful to Humans—Phenotypic, Proteomic and Molecular Detection. International Journal of Molecular Sciences; 25, 1–15.

Pawlicki P., Yurdakok-Dikmen B., Tworzydło W., Kotula-Balak M., 2024. Toward understanding the role of the interstitial tissue architects: Possible functions of telocytes in the male gonad. Theriogenology; 217, 25–36.

Sadowska A., Molcan T., Wójtowicz A., Łukasik K., Pawlina-Tyszko K., Gurgul A., Ferreira-Dias G., Skarzynski D. J., Szóstek-Mioduchowska A. Z., 2024. Bioinformatic analysis of endometrial miRNA expression profile at day 26-28 of pregnancy in the mare. Scientific Reports; 14, 1–14.

Semik‑Gurgul E., Gurgul A., Pawlina-Tyszko K., Gałuszka A. M., Pędziwiatr R., Witkowski M., Ząbek T., 2024. Involvement of Aberrant DNA Methylation in the Deregulated Expression of EHF, LPAR1, MPZL3, and POPDC2 Genes in Equine Sarcoids. Annals of Animal Science; 24, 99–107.

Babula A., Siemińska I., Baj-Krzyworzeka M., 2023. Isolation of Low Endotoxin Content Extracellular Vesicles Derived from Cancer Cell Lines. Journal of Visualized Experiments; 192, e65062.

Duliban M., Pawlicki P., Kamińska A., Yurdakok-Dikmen B., Tekin K., Kotula-Balak, M., 2023. Status of estrogen receptor expression and epigenetic methylation in Leydig cells after exposure to metalloestrogen - selenium. Reproductive Toxicology; 118: 108389.

Paweł Szczerbik, Michał Nowak, Jakub Nocoń, Ewa Łuszczek-Trojnar , Ewa Drąg-Kozak, Jarosław Chyb, Włodzimierz Popek, Study of the diets of two coexisting species – invasive Chinese sleeper (Perccottus glenii Dybowski, 1877) and native European perch (Perca fluviatilis Linnaeus, 1758)

Koseniuk A., Smołucha G., Gurgul A., Szmatoła T., Oczkowicz M., Radko A., 2023. Differentiation of the domestic pig and wild boar using genotyping-by-sequencing. Folia Biologica-Krakow; 71, 1–11.

Kucharski M., Mrowiec P., Białka S., Misiołek H., Misiołek M., Sechman A., Zięba-Przybylska D., Ocłoń, E., 2023. Nonviral transfection methods optimized for miRNA delivery to human dermal fibroblasts. Molecular Medicine Reports; 27, 1–8.

Pawlicki P., Koziorowska A., Koziorowski M., Pawlicka B., Duliban M., Wieczorek J., Płachno B.J., Pardyak L., Korzekwa A.J., Kotula-Balak M., 2023. Senescence and autophagy relation with the expressional status of non canonical estrogen receptors in testes and adrenals of roe deer (Capreolus capreolus) during the pre-rut period. Theriogenology; 198, 141–152.

Semik-Gurgul, E., Szmatoła T., Gurgul A., Pawlina-Tyszko, K., Gałuszka A.M., Pędziwiatr R., Witkowski M., Ząbek T., 2023. Methylome and transcriptome data integration reveals aberrantly regulated genes in equine sarcoids. Biochimie; 213, 100–113.

Simlat M., Ptak A., Jaglarz A., Szewczyk A., Dziurka M., Gurgul A., 2023. Seeds of Stevia rebaudiana Bertoni as a Source of Plant Growth-Promoting Endophytic Bacteria with the Potential to Synthesize Rebaudioside A. International Journal of Molecular Sciences; 24 (3), 2174.

Solomon G., Ocłoń E., Hayouka Z., Gertler A., 2023. Preparation of Superactive Prolactin Receptor Antagonists. Endocrinology; 164 (1), 1–10.

Wierzbicka A., Świątkiewicz M., Tyra M., Szmatoła T., Oczkowicz M., 2023. Effect of different doses of cholecalciferol and calcidiol on meat quality parameters and skeletal muscle transcriptome profiles in swine. Meat Science; 197, 109071.

Wrzesińska-Krupa B., Szmatoła T., Praczyk T., Obrępalska-Stęplowska A., 2023. Transcriptome analysis indicates the involvement of herbicide-responsive and plant-pathogen interaction pathways in the development of resistance to ACCase inhibitors in Apera spica-venti. Pest Management Science; 79, 1944–1962.

Wytrwal M., Sekuła-Stryjewska M., Pomorska A., Oclon E., Zuba-Surma E., Zapotoczny S., Szczubiałka K., 2023. Cellular Response to Bone Morphogenetic Proteins-2 and -7 Covalently Bound to Photocrosslinked Heparin–Diazoresin Multilayer. Biomolecules; 13 (5), 842.

Zabek T., Szmatola T., Adamczyk-Grochala J., Lewinska A., Wnuk M., 2023. Knockout of TRDMT1 methyltransferase affects DNA methylome in glioblastoma cells. Journal of Neuro-Oncology; 163 (1): 61-69.

Solomon G., Oclon E., Hayouka Z., Gertler A. Preparation of Superactive Prolactin Receptor Antagonists. Endocrinology: 164 (1): bqac186,

Chaber R., Gurgul A., Tabarkiewicz J., Wróbel G., Szmatoła T., Jasielczuk I., Haus O., Lejman M., Rybka B., Ryczan-Krawczyk R., Jaśkowiec A., Paszek S., Potocka N., Arthur C. J., Bal W., Łach K., Kowal A., Zawlik I., Latos-Grażyńska E., 2022. MicroRNA gene methylation landscape in pediatric B-cell precursor acute lymphoblastic leukemia. Advances in Clinical and Experimental Medicine; 31 (3), 293–305.

Czarna A.Z., Ziemiańska M., Pawlicki P., Carré J.M., Sedikides C., 2022. Narcissism moderates the association between basal testosterone and generosity in men. Hormones and Behavior; 1–12.

Kania B., Wrońska D., Szpręgiel I., Bracha U., 2022. Glutamate as a neural factor for the ex vivo release of catecholamines from the rabbit hippocampus. Medycyna Weterynaryjna; 78 (8), 383–387

Miler K., Stec D., Pardyak L., Kamińska A., Kuszewska K., 2022. No increase in alcohol dehydrogenase levels following repeated ethanol exposure in young honeybee workers. Physiological Entomology; 47 (2), 110–116.

Rogala J., Siemińska I., Baran J., Rubinkiewicz M., Zybaczyńska J., Szczepanik A.M., Pach R., 2022. Myeloid-Derived Suppressor Cells May Predict the Occurrence of Postoperative Complications in Colorectal Cancer Patients—a Pilot Stud. Journal of Gastrointestinal Surgery; 26, 2354–2357.

Siemińska I., Baran J., 2022. Myeloid-Derived Suppressor Cells as Key Players and Promising Therapy Targets in Prostate Cancer. Frontiers in Oncology; 12, 1–9.

Siemińska I., Pejsak Z., 2022. Impact of stress on the functioning of the immune system, swine health and productivity. Medycyna Weterynaryjna; 78(11), 541–547.

Arent Z., Pardyak L., Dubniewicz K., Płachno B., Kotula-Balak M. Leptospira taxonomy: then and now. Medycyna Weterynaryjna; 78 (10): 489–496.

Bryk-Wiązania A.H., Cysewski D., Ocłoń E., Undas A. Mass-spectrometric identification of oxidative modifications in plasma-purified plasminogen: Association with hypofibrinolysis in patients with acute pulmonary embolism. Biochemical and Biophysical Research Communications; 621: 53–58.

Gurgul A., Szmatoła T., Ocłoń E., Jasielczuk I., Semik-Gurgul E., Finno C.J., Petersen J.L., Bellone R., Hales E.N., Ząbek T., Arent Z., Kotula-Balak M., Bugno-Poniewierska M. Another lesson from unmapped reads: in-depth analysis of RNA-Seq reads from various horse tissues. Journal of Applied Genetics; 63: 571–581.

Kawęcka A., Podbielska A., Miksza-Cybulska A., Pasternak M., Sikora J., Szmatoła T. Genetic structure of reconstituted native Carpathian goat breed based on information from microsatellite markers. Annals of Animal Science; 22 (4): 1235–1244.

Kyselová J., Gurgul A., Jasielczuk I., Bugno-Poniewierska M., Mátlová V., Pikousová J., Mušková M., Jochová K., Tichý L., Sztankóová Z., Sakowski T. Investigation of genetic diversity and selection signatures in Czech cattle genetic resources revealed by genome-wide analysis. Livestock Science; 256: 104825.

Korwin-Kossakowska A., Ropka-Molik K., Ząbek T., Szmatoła T., Lewczuk D., Kościuczuk E., Marczak S. Bagnicka E. Gene expression adjustment of inflammatory mechanisms in dairy cow mammary gland parenchyma during host defense against staphylococci. Annals of Animal Science; 22 (3): 903–913.

Kotula-Balak M., Pawlicki P., Gałuszka A.M., Pardyak L., Tuz R., Dubniewicz K., Skrzypczak-Wiercioch A., Rak A., Dawid M., Tarasiuk K. Effect of immunocastration using Improvac on the regulation of adiponectin and leptin in the testes of Landrace boars. Medycyna Weterynaryjna; 78 (10): 497–502.

Lustofin S., Kamińska A., Brzoskwinia M., Pardyak L., Pawlicki P., Szpręgiel I., Bilińska B., Hejmej A. Follicle-stimulating hormone regulates Notch signalling in the seminiferous epithelium of continuously and seasonally breeding rodents. Reproduction, Fertility and Development; 34: 560–575.

Myćka G., Musiał A.D., Stefaniuk-Szmukier M., Długosz B., Piórkowska K., Bieniek A., Szmatoła T., Ropka-Molik K., PLNGene Analysis in Horses: Multiway Approach for the Investigation and Validation of Molecular Variation. Folia Biologica-Krakow; 70 (4): 1–8.

Oczkowicz M., Pawlina-Tyszko K., Świątkiewicz M., Szmatoła T. Feeding pigs with coconut oil affects their adipose miRNA profile. Molecular Biology Reports; 49: 6919–6929.

Pardyak L., Chmurska-Gąsowska M., Jaszcza K., Lonc G., Pawluś A., Trela M., Lis M., Bojarski B., Krakowska I., Kotula-Balak M. Diverse effect of in ovo treatment with metaloestrogen: selenium on chick testis histology and estrogen signaling. Medycyna Weterynaryjna; 78 (10): 526–531.

Pawlicki P., Galuszka A., Pardyak L., Tuz R., Płachno B.J., Malopolska M., Dubniewicz K., Yang P., Kotula-Balak M., Tarasiuk K. Leydig Cells in Immunocastrated Polish Landrace Pig Testis: Differentiation Status and Steroid Enzyme Expression Status. International Journal of Molecular Sciences; 23 (11): 6120.

Podstawski P., Ropka-Molik K., Semik-Gurgul E., Samiec M., Skrzyszowska M., Podstawski Z., Szmatoła T., Witkowski M., Pawlina-Tyszko K. Assessment of BPV-1 Mediated Matrix Metalloproteinase Genes Deregulation in the In Vivo and In Vitro Models Designed to Explore Molecular Nature of Equine Sarcoids. Cells; 11 (8): 1268.

Podstawski P., Ropka-Molik K., Semik-Gurgul E., Samiec M,. Skrzyszowska M., Podstawski Z., Szmatoła T., Witkowski M., Pawlina-Tyszko K. Tracking the Molecular Scenarios for Tumorigenic Remodeling of Extracellular Matrix Based on Gene Expression Profiling in Equine Skin Neoplasia Models. International Journal of Molecular Sciences; 23 (12): 6506.

Podstawski P., Samiec M., Skrzyszowska M., Szmatoła T., Semik-Gurgul E., Ropka-Molik K. The Induced Expression of BPV E4 Gene in Equine Adult Dermal Fibroblast Cells as a Potential Model of Skin Sarcoid-like Neoplasia. International Journal of Molecular Sciences; 23 (4): 1970.

Ptak A., Morańska E., Warchoł M., Gurgul A., Skrzypek E., Dziurka M., Laurain-Mattar D., Spina R., Jaglarz A., Simlat M. Endophytic bacteria from in vitro culture of Leucojum aestivum L. a new source of galanthamine and elicitor of alkaloid biosynthesis. Scientific Reports; 12: 13700.

Respekta N., Maślanka A., Mlyczyńska E., Billert M., Szlaga A., Sambak P., Pawlicki P., Płachno B., Skrzypski M., Kotula – Balak M., Błasiak A., Rak A. Levels of spexin and its receptors GALR2 and GALR3 in the hypothalamus and ovary of letrozole-induced polycystic ovary syndrome in rats. Biochemical and Biophysical Research Communications; 627: 207–213.

Szmatoła T., Gurgul A., Jasielczuk I., Oclon E., Ropka-Molik K., Stefaniuk-Szmukier M,. Polak G., Tomczyk-Wrona I., Bugno-Poniewierska M. Assessment and Distribution of Runs of Homozygosity in Horse Breeds Representing Different Utility Types. Animals; 12 (23): 3293.

Witkowski M., Duliban M., Rak A., Profaska-Szymik M., Gurgul A., Arent Z.J., Galuszka A., Kotula-Balak M., Next-Generation Sequencing analysis discloses genes implicated in equine endometrosis that may lead to tumorigenesis. Theriogenology; 189: 158–166.

Wytrwal-Sarna M., Sekuła-Stryjewska M., Pomorska A., Ocłoń E., Gajos K., Sarna M., Zuba-Surma E., Bernasik A., Szczubiałka K. The Effect of the Topmost Layer and the Type of Bone Morphogenetic Protein-2 Immobilization on the Mesenchymal Stem Cell Response. International Journal of Molecular Sciences; 23 (16): 9287.

Ząbek T., Witarski W., Semik-Gurgul E., Szmatoła T., Kowalska K., Samiec M. Differential expression and methylation patterns of NFATC1, NADSYN1 and JAK3 gene in equine chondrocytes expanded in monolayer culture. Research in Veterinary Science; 152: 48–52.

Ząbek T., Witarski W., Szmatoła T., Sawicki S., Mrozowicz J., Samiec M. Trichostatin A-Mediated Epigenetic Modulation Predominantly Triggers Transcriptomic Alterations in the Ex Vivo Expanded Equine Chondrocytes. International Journal of Molecular Sciences; 23 (21): 13168.

Zhu X., Wang Q., Pawlicki P., Wang Z., Pawlicka B., Meng X., Feng Y., Yang P. Telocytes and Their Structural Relationships With the Sperm Storage Tube and Surrounding Cell Types in the Utero-Vaginal Junction of the Chicken;Frontiers in Veterinary Science. 9:852407.

Arena R, Bisogno S., Gąsior Ł., Rudnicka J., Bernhardt L., Haaf T., Zacchini F., Bochenek M., Fic K., Bik E., Barańska M., Bodzoń-Kułakowska A., Suder P., Depciuch J., Gurgul A., Polański Z., Ptak G., Lipid droplets in mammalian eggs are utilized during embryonic diapause. Proceedings of the National Academy of Sciences of the United States of America; 118 (10): e2018362118.

Chmurska-Gąsowska M., Bojarski B., Sowińska N., Strus M. Changes in Leukogram and Erythrogram Results in Bitches with Vaginitis. Animals; 11 (5): 1403.

Chmurska-Gąsowska M., Sowińska N., Pałka S., Kmiecik M., Lenarczyk-Knapik J., Migdał Ł. Non-Invasive Measurement of Thyroid Hormones in Domestic Rabbits. Animals; 11 (5): 1194.

Danielewicz H., Gurgul A., Dębińska A., Myszczyszyn G., Szmatoła T., Myszkal A., Jasielczuk I., Drabik-Chamerska A., Hirnle L., Boznański A. Maternal atopy and offspring epigenome-wide methylation signature. Epigenetics-US; 16 (6): 629–641.

Domin A., Ząbek T., Kwiatkowska A., Szmatoła T., Deregowska A., Lewinska A., Mazur A., Wnuk M. The Identification of a Novel Fucosidosis-Associated FUCA1 Mutation: A Case of a 5-Year-Old Polish Girl with Two Additional Rare Chromosomal Aberrations and Affected DNA Methylation Patterns. Genes; 12 (1): 74.

Grzegorczyk J., Gurgul A., Oczkowicz M., Szmatoła T., Fornal A., Bugno-Poniewierska M. Single Nucleotide Polymorphism Discovery and Genetic Differentiation Analysis of Geese Bred in Poland, Using Genotyping-by-Sequencing (GBS). Genes; 12 (7): 1074.

Gurgul A., Jasielczuk I., Miksza-Cybulska A., Kawęcka A., Szmatoła T., Krupiński J. Evaluation of genetic differentiation and genome-wide selection signatures in Polish local sheep breeds. Livestock Science; 251: 104635.

Jaworska J., Ropka-Molik K., Piórkowska K., Szmatoła T., Kowalczyk-Zięba I., Wocławek-Potocka I., Siemieniuch M. Transcriptome Profiling of the Retained Fetal Membranes—An Insight in the Possible Pathogenesis of the Disease. Animals; 11 (3): 675.

Kucharski M., Mrowiec P., Ocłoń E. Current standards and pitfalls associated with the transfection of primary fibroblast cells. Biotechnology Progress; 37 (4): e3152.

Leal L.F., Szarek E., Berthon A., Nesterova M., Faucz F.R., London E., Mercier C., Abu-Asab M., Starost M.F., Dye L., Bilinska B., Kotula-Balak M., Antonini S.R., Stratakis C.A. Pde8b haploinsufficiency in mice is associated with modest adrenal defects, impaired steroidogenesis, and male infertility, unaltered by concurrent PKA or Wnt activation. Molecular and Cellular Endocrinology; 522: 111117.

Ocłoń E., Hrabia A. miRNA expression profile in chicken ovarian follicles throughout development and miRNA-mediated MMP expression. Theriogenology; 160: 116–127.

Pawlina-Tyszko K., Semik-Gurgul E., Gurgul A., Oczkowicz M., Szmatoła T., Bugno-Poniewierska M., Application of the targeted sequencing approach reveals the single nucleotide polymorphism (SNP) repertoire in microRNA genes in the pig genome. Scientific Reports; 11: 9848.

Pepłońska B., Piestrzynska-Kajtoch A., Humińska-Lisowska K., Adamczyk J.G., Siewierski M., Gurgul A., Fornal A., Michałowska-Sawczyn M., Żekanowski C., Cięszczyk P., Berdyński M. Common Myelin Regulatory Factor Gene Variants Predisposing to Excellence in Sports. Genes; 12 (2): 262.

Polak G., Gurgul A., Jasielczuk I., Szmatoła T., Krupiński J., Bugno-Poniewierska M. Suitability of Pedigree Information and Genomic Methods for Analyzing Inbreeding of Polish Cold-Blooded Horses Covered by Conservation Programs. Genes; 12 (3): 429.

Ramisz G., Turek W., Chmurska-Gąsowska M., Rak A., Pietsch-Fulbiszewska A., Gałuszka A.M., Kotula-Balak M., Tarasiuk K. Senescence and adiponectin signaling — Studies in canine testis. Annals of Anatomy-Anatomischer Anzeiger; 234: 151606.

Salamon D., Sroka-Oleksiak A., Gurgul A., Arent Z., Szopa M., Bulanda M., Małecki M.T., Gosiewski T. Analysis of the Gut Mycobiome in Adult Patients with Type 1 and Type 2 Diabetes Using Next-Generation Sequencing (NGS) with Increased Sensitivity—Pilot Study. Nutrients; 13 (4): 1066.

Słowińska M., Pardyak L., Liszewska E., Judycka S., Bukowska J., Dietrich M.A., Paukszto Ł., Jastrzębski J., Kozłowski K., Kowalczyk A., Jankowski J., Bilińska B., Ciereszko A. Characterization and biological role of cysteine-rich venom protein belonging to CRISPs from turkey seminal plasma. Biology of Reproduction; 104 (6): 1302–1321.

Smołucha G., Gurgul A., Jasielczuk I., Kawęcka A., Miksza-Cybulska A. A genome-wide association study for prolificacy in three Polish sheep breeds. Journal of Applied Genetics; 62: 323–326.

Witek P., Grzesiak M., Kotula-Balak M., Koziorowski M., Słomczyńska M., Knapczyk-Stwora K. Effect of neonatal exposure to endocrine-active compounds on epigenetic regulation of gene expression in corpus luteum of gilts. Theriogenology; 159: 45–52.

Antkowiak R., Antkowiak Ł., Grzegorczyn S., Nalik-Iwaniak K., Kabała N., Arent Z., Warmusz-Reichman E., Stęplewska K., Domosławski P. Efficacy of intra-arterial lidocaine infusion in the treatment of cerulein-induced acute pancreatitis. Advances in Clinical and Experimental Medicine; 29 (5): 587–595.

Brzoskwinia M., Pardyak L., Rak A., Kamińska A., Hejmej A., Marek S., Kotula-Balak M., Bilinska B. Flutamide Alters the Expression of Chemerin, Apelin, and Vaspin and Their Respective Receptors in the Testes of Adult Rats. International Journal of Molecular Sciences; 21 (12): 4439.

Chmurska-Gąsowska M., Sowińska N. Hormonal regulation of pregnancy and related behavioral changes in rabbits. Medycyna Weterynaryjna; 76 (1): 6332–2020.

Duliban M., Gorowska-Wojtowicz E., Tworzydlo W., Rak A., Brzoskwinia M., Krakowska I., Wolski J.K., Kotula-Balak M., Płachno B.J., Bilinska B. Interstitial Leydig Cell Tumorigenesis—Leptin and Adiponectin Signaling in Relation to Aromatase Expression in the Human Testis. International Journal of Molecular Sciences; 21 (10): 3649.

Duliban M, Gurgul A, Szmatola T, Pawlicki P, Milon A, Arent ZJ, Grzmil P, Kotula-Balak M, Bilinska B. Mouse testicular transcriptome after modulation of non-canonical oestrogen receptor activity. Reproduction Fertility and Development; 32 (10): 903–913.

Grzegorzewska A., Ocłoń E., Kucharski M., Sechman A. Effect of in vitro sodium fluoride treatment on CAT, SOD and Nrf mRNA expression and immunolocalisation in chicken (Gallus domesticus) embryonic gonads. Theriogenology; 157: 263–275.

Gurgul A., Jasielczuk I., Semik-Gurgul E., Pawlina-Tyszko K., Szmatoła T., Polak G., Bugno-Poniewierska M. Genetic differentiation of the two types of Polish cold-blooded horses included in the National Conservation Program. Animals; 10 (3): 542.

Gurgul A., Jasielczuk I., Szmatoła T., Sosin-Bzducha E., Majewska A., Litwińczuk Z. Divergent selection signatures of phenotypic and production traits among conserved and commercial cattle breeds. Livestock Science; 239 (3): 104174.

Hołda, M.K., Stachowicz, A., Suski, M., Wojtysiak D., Sowińska N., Arent Z., Palka N., Podolec P., Kopeć G. Myocardial proteomic profile in pulmonary arterial hypertension. Scientific Reports; 10: 14351.

Hołda M.K., Szczepanek E., Bielawska J., Palka N., Wojtysiak D., Frączek P., Nowakowski M., Sowińska N., Arent Z., Podolec P., Kopeć G. Changes in heart morphometric parameters over the course of a monocrotaline-induced pulmonary arterial hypertension rat model. Journal of Translational Medicine; 18 (1): 262.

Jasielczuk I., Gurgul A., Szmatoła T., Semik-Gurgul E., Pawlina-Tyszko K., Szyndler-Nędza M., Blicharski T., Szulc K., Skrzypczak E., Bugno-Poniewierska M. Comparison of linkage disequilibrium, effective population size and haplotype blocks in Polish Landrace and Polish native pig populations. Livestock Science; 231: 103887.

Jasielczuk I., Gurgul A., Szmatoła T., Semik-Gurgul E., Pawlina-Tyszko K., Stefaniuk-Szmukier M., Polak G., Tomczyk-Wrona I., Bugno-Poniewierska M. Linkage disequilibrium, haplotype blocks and historical effective population size in Arabian horses and selected Polish native horse breeds. Livestock Science; 239: 104095.

Kalamon N., Błaszczyk K., Szlaga A., Billert M., Skrzypski M., Pawlicki P., Gorowska-Wojtowicz E., Kotula-Balak M., Błasiak A., Rak A. Levels of the neuropeptide phoenixin-14 and its receptor GRP173 in the hypothalamus, ovary and periovarian adipose tissue in rat model of polycystic ovary syndrome. Biochemical and Biophysical Research Communications; 528 (4): 628–635.

Kamińska A., Marek S., Pardyak L., Brzoskwinia M., Bilinska B., Hejmej A. A Crosstalk between Androgen-ZIP9 Signaling and Notch Pathway in Rodent Sertoli Cells. International Journal of Molecular Sciences; 21 (21): 8275.

Kamińska A., Pardyak L., Marek S., Wróbel K., Kotula-Balak M., Blińska B., Hejmej A. Notch signaling regulates nuclear androgen receptor AR and membrane androgen receptor ZIP9 in mouse Sertoli cells. Andrology; 8 (2): 457–472.

Kędzierska-Mieszkowska S., Arent Z. AAA+ Molecular Chaperone ClpB in Leptospira interrogans: Its Role and Significance in Leptospiral Virulence and Pathogenesis of Leptospirosis. International Journal of Molecular Sciences; 21 (18): 6645.

Korwin-Kossakowska A., Ropka-Molik K., Ząbek T., Szmatoła T., Brzozowska P., Gralak B., Kawecka-Grochowska E., Bagnicka E. Structural and functional analysis of the signaling lymphocytic activation molecule family 7 (SLAMF7) gene in response to infection with coagulase-negative and coagulase-positive staphylococci. Journal of Dairy Science; 103 (9): 8317–8329.

Kotula-Balak M., Duliban M., Pawlicki P., Tuz R., Bilińska B., Płachno B., Arent Z., Krakowska I., Tarasiuk K. The meaning of non-classical estrogen receptors and peroxisome proliferator-activated receptor for boar Leydig cell of immature testis. Acta Histochemica; 122 (3): 151526.

Kotula-Balak M., Gorowska-Wojtowicz E., Milon A., Pawlicki P., Tworzydło W., Płachno B.J., Krakowska I., Hejmej A., Wolski J.K., Bilińska B. Towards understanding leydigioma: do G protein-coupled estrogen receptor and peroxisome proliferator–activated receptor regulate lipid metabolism and steroidogenesis in Leydig cell tumors? Protoplasma; 257 (4): 1149–1163.

Mlyczyńska E., Kurowska P., Drwal E., Opydo-Chanek M., Tworzydło W., Kotula-Balak M., Rak A. Apelin and apelin receptor in human placenta: Expression, signalling pathway and regulation of trophoblast JEG-3 and BeWo cells proliferation and cell cycle. International Journal of Molecular Medicine; 45 (3): 691–702.

Ocalewicz K., Gurgul A., Polonis M., Dobosz S. Preliminary Identification of Candidate Genes Related to Survival of Gynogenetic Rainbow Trout (Oncorhynchus mykiss) Based on Comparative Transcriptome Analysis. Animals; 10 (8): 1326.

Ocłoń E., Hrabia A. Selection of the Most Stable Endogenous Control Genes for MicroRNA Quantitation in Chicken Ovarian Follicles. Annals of Animal Science; 20 (1): 109–123.

Oczkowicz M., Szmatoła T., Świątkiewicz M., Koseniuk A., Smołucha G., Witarski W., Wierzbicka A. 3’quant mRNA-Seq of Porcine Liver Reveals Alterations in UPR, Acute Phase Response, and Cholesterol and Bile Acid Metabolism in Response to Different Dietary Fats. Genes; 11(9), 1087;

Pardyak L., Kamińska A., Brzoskwinia M., Hejmej A., Kotula-Balak M., Jankowski J., Ciereszko A., Bilińska B. Differential expression of cell-cell junction proteins in the testis, epididymis, and ductus deferens of domestic turkeys (Meleagris gallopavo) with white and yellow semen. Poultry Science; 99 (1): 555–566.

Pasternak M., Krupiński J., Gurgul A., Bugno-Poniewierska M. Genetic, historical and breeding aspects of the occurrence of the tobiano pattern and white markings in the Polish population of Hucul horses – a review. Journal of Applied Animal Research; 48 (1): 21–27.

Pawlina-Tyszko K., Oczkowicz M., Gurgul A., Szmatoła T., Bugno-Poniewierska M. MicroRNA profiling of the pig periaqueductal grey (PAG) region reveals candidates potentially related to sex-dependent differences. Biology of Sex Differences; 11: 67.

Pejsak Z., Truszczyński M., Arent Z. Leptospiroza świń w świetle obecnie akceptowalnej charakterystyki. Medycyna Weterynaryjna; 76 (10): 555–558.

Piórkowska K.L., Szmatoła T., Pawlina-Tyszko K., Gurgul A., Żak G., Ropka-Molik K. Identification of mRNA Degradome Variation Dependent on Divergent Muscle Mass in Different Pig Breeds. Annals of Animal Science; 20 (4): 1241–1256.

Podstawski P., Witarski W., Szmatoła T., Bugno-Poniewierska M., Ropka-Molik K. Mobility and Invasion Related Gene Expression Patterns in Equine Sarcoid. Animals, 10 (5): 880.

Profaska-Szymik M., Gałuszka A.M., Korzekwa A.J., Hejmej A., Gorowska-Wojtowicz E., Pawlicki P., Kotula-Balak M., Tarasiuk K., Tuz R. Implication of Membrane Androgen Receptor (ZIP9) in Cell Senescence in Regressed Testes of the Bank Vole. International Journal of Molecular Sciences; 21 (18): 6888.

Ropka-Molik K., Pawlina-Tyszko K., Żukowski K., Tyra M., Derebecka N., Wesoły J., Szmatoła T., Piórkowska K. Identification of Molecular Mechanisms Related to Pig Fatness at the Transcriptome and miRNAome Levels. Genes; 11 (6): 600.

Sroka-Oleksiak A., Gosiewski T., Pabian W., Gurgul A., Kapusta P., Ludwig-Słomczyńska A.H., Wołkow P.P., Brzychczy-Włoch M. Next-Generation Sequencing as a Tool to Detect Vaginal Microbiota Disturbances during Pregnancy. Microorganisms; 8 (11): 1813.

Szmatoła T., Jasielczuk I., Semik-Gurgul E., Szyndler-Nędza M., Blicharski T., Szulc K., Skrzypczak E., Gurgul A. Detection of runs of homozygosity in conserved and commercial pig breeds in Poland. Journal of Animal Breeding and Genetics; 137 (6): 571–580.

Szmatoła T., Gurgul A., Jasielczuk I., Fu W., Ropka-Molik K. A detailed characteristics of bias associated with long runs of homozygosity identification based on medium density SNP microarrays. Journal of Genomics; 8: 43–48.

Talebi R., Szmatoła T., Mészáros G., Qanbari S. Runs of Homozygosity in Modern Chicken Revealed by Sequence Data. G3 (Bethesda); 10 (12): 4615–4623.

Ząbek T, Semik-Gurgul E, Ropka-Molik K, Szmatoła T, Kawecka-Grochocka E, Zalewska M, Kościuczuk E, Wnuk M, Bagnicka E. Short communication: Locus-specific interrelations between gene expression and DNA methylation patterns in bovine mammary gland infected by coagulase-positive and coagulase-negative staphylococci. Journal of Dairy Science; 103 (11): 10689–10695.

Arent Z., Ellis W.A. Leptospirosis. 55: 854 – 862.

Dobrek Ł., Arent Z., Nalik-Iwaniak K., Fic K. Osteopontin and fatty acid binding protein (FABP), as biomarkers of cyclophosphamide nephrotoxicity, in an experimental model of cystitis in rats. Postępy Higieny i Medycyny Doświadczalnej; 73: 282–293.

Dobrek Ł., Arent Z., Nalik-Iwaniak K., Fic K., Kopańska M. Osteopontin and fatty acid binding protein in ifosfamide-treated rats. Open Medicine; 14 (1): 561–571.

Gorowska-Wojtowicz E., Duliban M., Kudrycka M., Dutka P., Pawlicki P., Milon A., Zarzycka B., Placha W., Kotula-Balak M., Ptak A., Wolski J.K., Blińska B. Leydig cell tumorigenesis - implication of G-protein coupled membrane estrogen receptor, peroxisome proliferator-activated receptor and xenoestrogen exposure. In vivo and in vitro appraisal. Tissue & Cell; 61: 51–60.

Gurgul A., Jasielczuk I., Ropka-Molik K., Piestrzyńska-Kajtoch A., Szmatoła T., Bugno-Poniewierska M., Krupiński J. Ocena zmienności genetycznej oraz genetycznej podatności na wybrane jednostki chorobowe polskich ras zachowawczych oraz innych małych populacji zwierząt gospodarskich utrzymywanych w Polsce w oparciu o klasyczne i wielkoskalowe badania genetyczne. Rasy rodzime zwierząt gospodarskich w badaniach projektu Biostrateg II w latach 2016-2019. Instytut Zootechniki Państwowy Instytut Badawczy, ISBN 978-83-7607-305-7.

Kędzierska-Mieszkowska S., Potrykus K., Arent Z., Krajewska J. Identification of σ ^E-Dependent Promoter Upstream of clpB from the Pathogenic Spirochaete Leptospira interrogans by Applying an E. coli Two-Plasmid System. International Journal of Molecular Sciences; 20 (24): 6325.

Kirsz K., Szczęsna M., Bocheńska A., Pietsch-Fulbiszewska A., Sowińska N., Kabała N., Zięba-Przybylska D. Effects of central orexin A on gonadotropins and progesterone secretion in ewes during the luteal phase of the estrous cycle and during anestrus. Small ruminant research; 177 (35): 82–88.

Milon A., Knapczyk-Stwora K., Pawlicki P., Duliban M., Gorowska-Wojtowicz E., Kotula-Balak M., Blińska B. Effect of estrogen-related receptor silencing on miRNA protein machinery expression, global methylation, and deacetylation in bank vole (Myodes glareolus) and mouse tumor Leydig cells. Theriogenology; 139: 178–190.

Ocalewicz K., Gurgul A., Pawlina-Tyszko K., Szmatoła T., Jasielczuk I., Bugno-Poniewierska M., Dobosz S. Induced androgenetic development in rainbow trout and transcriptome analysis of irradiated eggs. Scientific Reports; 9: 8084.

Oczkowicz M., Szmatoła T., Świątkiewicz M. Source of Dietary Fat in Pig Diet Affects Adipose Expression of Genes Related to Cancer, Cardiovascular, and Neurodegenerative Diseases. Genes; 10 (12): 948.

Pasternak M., Krupiński J., Gurgul A., Bugno-Poniewierska M. The Genetic Basis of Piebald Coat Colour in Hucul Horses in the Context of White Markings and Crypto-Tobiano as a Breeding Problem in Poland. Annals of Animal Science; 19 (4): 955–966.

Ropka-Molik K., Stefaniuk-Szmukier M., Szmatoła T., Piórkowska K., Bugno-Poniewierska M. The use of the SLC16A1 gene as a potential marker to predict race performance in Arabian horses. BMC Genetics; 20: 73.

Stefaniuk-Szmukier M., Szmatoła T., Łątka J., Długosz B., Ropka-Molik K. The Blood and Muscle Expression Pattern of the Equine TCAP Gene during the Race Track Training of Arabian Horses. Animals; 9 (8): 574.

Szmatoła T., Gurgul A., Jasielczuk I., Ząbek T., Ropka-Molik K., Litwińczuk Z., Bugno-Poniewierska M. A Comprehensive Analysis of Runs of Homozygosity of Eleven Cattle Breeds Representing Different Production Types. Animals; 9 (12): 1024.

Warzecha J., Oczkowicz M., Rubis D., Fornal A., Szmatoła T., Bugno-Poniewierska M. An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers. Animals; 9 (10): 737.

Ząbek T., Semik-Gurgul E., Szmatoła T., Gurgul A., Fornal A., Bugno-Poniewierska M. Methylation Marks of Blood Leukocytes of Native Hucul Mares Differentiated in Age. International Journal of Genomics; 2019: 2839614.

Ząbek T., Witarski W., Semik-Gurgul E., Szmatoła T., Kowalska K., Bugno-Poniewierska M. Chondrogenic expression and DNA methylation patterns in prolonged passages of chondrocyte cell lines of the horse. Gene, 707: 58-64.

Hołda M.K., Pietsch-Fulbiszewska A., Trybus M., Koziej M. Morphological variations of the interatrial septum in ovine heart. PLoS One; 13 (12): e0209604.

Krajewska J., Arent Z., Zolkiewski M., Kędzierska-Mieszkowska S. Isolation and Identification of Putative Protein Substrates of the AAA+ Molecular Chaperone ClpB from the Pathogenic Spirochaete Leptospira interrogans. International Journal of Molecular Sciences; 19 (4): 1234.

Lutnicka H., Bojarski B., Witeska M., Chmurska-Gąsowska M., Trybus W., Trybus E., Kopacz-Bednarska A., Lis M. Effects of MCPA Herbicide on Hematological Parameters and Ultrastructure of Hematopoietic Tissues of Common Carp (Cyprinus carpio L.). Folia Biologica (Kraków); 66, (1): 1–11.

Żmudzki J., Arent Z., Jabłoński A., Nowak A., Zębek S., Stolarek A., Bocian Ł., Brzana A., Pejsak Z. Seroprevalence of 12 serovars of pathogenic Leptospira in red foxes (Vulpes vulpes) in Poland. Acta Veterinaria Scandinavica; 60: 34.

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